variant_stores

Creates, updates, deletes or gets a variant_store resource or lists variant_stores in a region

Overview

Name	variant_stores
Type	Resource
Description	Definition of AWS::Omics::VariantStore Resource Type
Id	awscc.omics.variant_stores

Fields

get (all properties)

Name	Datatype	Description
creation_time	string
description	string
id	string
name	string
▶reference	object
▶sse_config	object
status	string
status_message	string
store_arn	string
store_size_bytes	number
tags	object	A map of resource tags
update_time	string
region	string	AWS region.

list (identifiers only)

Name	Datatype	Description
name	string
region	string	AWS region.

For more information, see AWS::Omics::VariantStore.

Methods

Name	Resource	Accessible by	Required Params
create_resource	variant_stores	INSERT	Name, Reference, region
delete_resource	variant_stores	DELETE	Identifier, region
update_resource	variant_stores	UPDATE	Identifier, PatchDocument, region
list_resources	variant_stores_list_only	SELECT	region
get_resource	variant_stores	SELECT	Identifier, region

SELECT examples

get (all properties)

Gets all properties from an individual variant_store.

SELECT
  region,
  creation_time,
  description,
  id,
  name,
  reference,
  sse_config,
  status,
  status_message,
  store_arn,
  store_size_bytes,
  tags,
  update_time
FROM awscc.omics.variant_stores
WHERE
  region = 'us-east-1' AND
  Identifier = '{{ name }}';

list (identifiers only)

Lists all variant_stores in a region.

SELECT
  region,
  name
FROM awscc.omics.variant_stores_list_only
WHERE
  region = 'us-east-1';

INSERT example

Use the following StackQL query and manifest file to create a new variant_store resource, using stack-deploy.

Required Properties

/*+ create */
INSERT INTO awscc.omics.variant_stores (
  Name,
  Reference,
  region
)
SELECT
  '{{ name }}',
  '{{ reference }}',
  '{{ region }}';

All Properties

/*+ create */
INSERT INTO awscc.omics.variant_stores (
  Description,
  Name,
  Reference,
  SseConfig,
  Tags,
  region
)
SELECT
  '{{ description }}',
  '{{ name }}',
  '{{ reference }}',
  '{{ sse_config }}',
  '{{ tags }}',
  '{{ region }}';

Manifest

version: 1
name: stack name
description: stack description
providers:
  - aws
globals:
  - name: region
    value: '{{ vars.AWS_REGION }}'
resources:
  - name: variant_store
    props:
      - name: description
        value: '{{ description }}'
      - name: name
        value: '{{ name }}'
      - name: reference
        value:
          reference_arn: '{{ reference_arn }}'
      - name: sse_config
        value:
          type: '{{ type }}'
          key_arn: '{{ key_arn }}'
      - name: tags
        value: {}

UPDATE example

Use the following StackQL query and manifest file to update a variant_store resource, using stack-deploy.

/*+ update */
UPDATE awscc.omics.variant_stores
SET PatchDocument = string('{{ {
    "Description": description
} | generate_patch_document }}')
WHERE
  region = '{{ region }}' AND
  Identifier = '{{ name }}';

DELETE example

/*+ delete */
DELETE FROM awscc.omics.variant_stores
WHERE
  Identifier = '{{ name }}' AND
  region = 'us-east-1';

Permissions

To operate on the variant_stores resource, the following permissions are required:

Create

omics:CreateVariantStore,
omics:TagResource,
kms:DescribeKey,
kms:GenerateDataKey,
kms:CreateGrant,
ram:AcceptResourceShareInvitation,
ram:GetResourceShareInvitations,
omics:GetVariantStore

Read

omics:GetVariantStore

Update

omics:UpdateVariantStore,
omics:TagResource,
omics:UntagResource,
omics:ListTagsForResource,
omics:GetVariantStore

Delete

omics:DeleteVariantStore,
omics:ListVariantStores

List

omics:ListVariantStores